Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.33■■□□□ 1
SH3RF2Q8TEC5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.33■■□□□ 1
SH3RF2Q8TEC5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.33■■□□□ 1
SH3RF2Q8TEC5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 RPS2P52-201ENST00000469610 820 ntBASIC21.32■■□□□ 1
SH3RF2Q8TEC5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 AC105020.6-201ENST00000621523 1217 ntBASIC21.32■■□□□ 1
SH3RF2Q8TEC5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.32■■□□□ 1
SH3RF2Q8TEC5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 AC026310.3-201ENST00000625186 2373 ntBASIC21.31■■□□□ 1
SH3RF2Q8TEC5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 AC093827.2-201ENST00000512654 315 ntBASIC21.31■■□□□ 1
SH3RF2Q8TEC5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
SH3RF2Q8TEC5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 AC073648.6-201ENST00000641589 218 ntBASIC21.3■■□□□ 1
SH3RF2Q8TEC5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3RF2Q8TEC5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 AC092368.3-202ENST00000574180 1591 ntBASIC21.29■■□□□ 1
SH3RF2Q8TEC5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 GCSHP5-201ENST00000443090 522 ntBASIC21.29■■□□□ 1
SH3RF2Q8TEC5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 PNMA6B-201ENST00000538162 1200 ntBASIC21.29■■□□□ 1
SH3RF2Q8TEC5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.29■■□□□ 1
SH3RF2Q8TEC5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.28■■□□□ 1
SH3RF2Q8TEC5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF2Q8TEC5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms