Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 AC099778.1-201ENST00000568593 1911 ntBASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC71LQ8N9Z2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 AL512631.2-201ENST00000604634 923 ntBASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC71LQ8N9Z2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC71LQ8N9Z2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 BX005040.4-201ENST00000637145 1518 ntBASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 AC092720.2-201ENST00000602388 1665 ntBASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 AC112907.3-201ENST00000577781 2400 ntBASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC71LQ8N9Z2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71LQ8N9Z2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC71LQ8N9Z2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CCDC71LQ8N9Z2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71LQ8N9Z2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71LQ8N9Z2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.02■□□□□ 0.31
CCDC71LQ8N9Z2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CCDC71LQ8N9Z2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 AC090340.1-201ENST00000620778 4980 ntBASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC71LQ8N9Z2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC71LQ8N9Z2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms