Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SYNPOQ8N3V7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 ECEL1P3-201ENST00000427961 737 ntBASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 AC116050.2-201ENST00000612102 1779 ntBASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SYNPOQ8N3V7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 FAM210CP-201ENST00000445714 574 ntBASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 C2orf69P4-201ENST00000565394 541 ntBASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 AC233702.5-201ENST00000584107 538 ntBASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 LINC01023-201ENST00000606054 436 ntBASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 AP001412.1-201ENST00000608405 714 ntBASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SYNPOQ8N3V7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 KRT17P2-201ENST00000300992 1314 ntBASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 AC211429.1-201ENST00000415277 523 ntBASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 AC133681.1-201ENST00000465482 601 ntBASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SYNPOQ8N3V7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPOQ8N3V7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPOQ8N3V7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPOQ8N3V7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SYNPOQ8N3V7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPOQ8N3V7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPOQ8N3V7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SYNPOQ8N3V7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SYNPOQ8N3V7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 RPS2P55-201ENST00000397318 883 ntBASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms