Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPAS4Q8IUM7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 AC239809.2-201ENST00000415381 517 ntBASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 AL023875.1-201ENST00000640777 796 ntBASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.13■■□□□ 1.13
NPAS4Q8IUM7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 RPS2P55-201ENST00000397318 883 ntBASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 AC107956.1-201ENST00000494359 873 ntBASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 AC006557.6-201ENST00000623071 864 ntBASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPAS4Q8IUM7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.11■■□□□ 1.13
NPAS4Q8IUM7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 GUSBP5-202ENST00000510805 1989 ntBASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 AL390719.1-204ENST00000412397 1219 ntBASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPAS4Q8IUM7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 REXO1L12P-201ENST00000622156 912 ntBASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPAS4Q8IUM7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NPAS4Q8IUM7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms