Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.412e-8■■■□□ 17.5
LARP4Q71RC2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.212e-8■■■□□ 17.5
LARP4Q71RC2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.36■□□□□ 0.052e-8■■■□□ 17.5
LARP4Q71RC2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.112e-8■■■□□ 17.5
LARP4Q71RC2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.252e-8■■■□□ 17.5
LARP4Q71RC2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.272e-8■■■□□ 17.5
LARP4Q71RC2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.041e-6■■■□□ 17.5
LARP4Q71RC2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.044e-6■■■□□ 17.5
LARP4Q71RC2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.65■□□□□ 0.261e-6■■■□□ 17.5
LARP4Q71RC2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.65■□□□□ 0.261e-6■■■□□ 17.5
LARP4Q71RC2 H3F3B-207ENST00000589417 575 ntTSL 216.11■□□□□ 0.171e-8■■■□□ 17.5
LARP4Q71RC2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.071e-8■■■□□ 17.5
LARP4Q71RC2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 01e-6■■■□□ 17.5
LARP4Q71RC2 PYCR2-206ENST00000478402 3149 ntTSL 214.47□□□□□ -0.091e-6■■■□□ 17.5
LARP4Q71RC2 NXN-203ENST00000571080 476 ntTSL 514.15□□□□□ -0.145e-6■■■□□ 17.5
LARP4Q71RC2 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.343e-16■■■□□ 17.5
LARP4Q71RC2 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.481e-8■■■□□ 17.5
LARP4Q71RC2 H3F3B-205ENST00000587171 586 ntTSL 212□□□□□ -0.491e-8■■■□□ 17.5
LARP4Q71RC2 SEC61A1-205ENST00000483956 3046 ntTSL 1 (best)11.41□□□□□ -0.581e-8■■■□□ 17.5
LARP4Q71RC2 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC11.22□□□□□ -0.611e-8■■■□□ 17.5
LARP4Q71RC2 RAB11A-204ENST00000565075 711 ntTSL 2 BASIC10.69□□□□□ -0.71e-8■■■□□ 17.5
LARP4Q71RC2 MRPL27-206ENST00000511860 869 ntTSL 5 BASIC10.33□□□□□ -0.763e-16■■■□□ 17.5
LARP4Q71RC2 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC10.06□□□□□ -0.83e-16■■■□□ 17.5
LARP4Q71RC2 MRPL27-205ENST00000508200 636 ntTSL 310.06□□□□□ -0.83e-16■■■□□ 17.5
LARP4Q71RC2 MRPL27-204ENST00000507088 732 ntTSL 3 BASIC10□□□□□ -0.813e-16■■■□□ 17.5
LARP4Q71RC2 RAB11A-203ENST00000564910 978 ntTSL 2 BASIC9.99□□□□□ -0.811e-8■■■□□ 17.5
LARP4Q71RC2 MRPL27-203ENST00000503633 742 ntTSL 3 BASIC9.19□□□□□ -0.943e-16■■■□□ 17.5
LARP4Q71RC2 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC9.06□□□□□ -0.961e-8■■■□□ 17.5
LARP4Q71RC2 NXN-208ENST00000575171 544 ntTSL 29.02□□□□□ -0.975e-6■■■□□ 17.5
LARP4Q71RC2 ZMAT2-201ENST00000274712 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.041e-8■■■□□ 17.5
LARP4Q71RC2 ZMAT2-202ENST00000506644 735 ntTSL 37.5□□□□□ -1.211e-8■■■□□ 17.5
LARP4Q71RC2 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC7.49□□□□□ -1.211e-8■■■□□ 17.5
LARP4Q71RC2 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.221e-8■■■□□ 17.5
LARP4Q71RC2 RAB11A-208ENST00000569304 347 ntTSL 35.47□□□□□ -1.531e-8■■■□□ 17.5
LARP4Q71RC2 MRPS24-204ENST00000467084 729 ntTSL 213.52□□□□□ -0.251e-7■■■□□ 17.5
LARP4Q71RC2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.092e-9■■■□□ 17.5
LARP4Q71RC2 PFDN2-202ENST00000468311 408 ntTSL 221.06■□□□□ 0.962e-9■■■□□ 17.5
LARP4Q71RC2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.342e-6■■■□□ 17.5
LARP4Q71RC2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.572e-6■■■□□ 17.5
LARP4Q71RC2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.42e-6■■■□□ 17.5
LARP4Q71RC2 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.892e-6■■■□□ 17.5
LARP4Q71RC2 PPT1-208ENST00000529905 1836 ntTSL 514.38□□□□□ -0.114e-8■■■□□ 17.5
LARP4Q71RC2 RPLP2-205ENST00000527517 646 ntTSL 211.01□□□□□ -0.653e-57■■■□□ 17.5
LARP4Q71RC2 RPLP2-203ENST00000525722 489 ntTSL 210.22□□□□□ -0.773e-57■■■□□ 17.5
LARP4Q71RC2 RPLP2-204ENST00000526222 350 ntTSL 210.22□□□□□ -0.773e-57■■■□□ 17.5
LARP4Q71RC2 DRAP1-204ENST00000525501 695 ntTSL 525.21■■□□□ 1.632e-6■■■□□ 17.5
LARP4Q71RC2 ANAPC11-220ENST00000584197 386 ntTSL 523.82■■□□□ 1.41e-9■■■□□ 17.4
LARP4Q71RC2 JPT1-211ENST00000581874 517 ntTSL 5 BASIC7.69□□□□□ -1.189e-8■■■□□ 17.4
LARP4Q71RC2 ANKMY1-222ENST00000484526 2969 ntTSL 216.74■□□□□ 0.276e-6■■■□□ 17.4
LARP4Q71RC2 ANKMY1-224ENST00000496300 1569 ntTSL 514.25□□□□□ -0.136e-6■■■□□ 17.4
LARP4Q71RC2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.12□□□□□ -0.156e-6■■■□□ 17.4
LARP4Q71RC2 ANKMY1-216ENST00000443318 565 ntTSL 312.94□□□□□ -0.346e-6■■■□□ 17.4
LARP4Q71RC2 ANKMY1-218ENST00000462004 582 ntTSL 412.52□□□□□ -0.416e-6■■■□□ 17.4
LARP4Q71RC2 ANKMY1-215ENST00000441168 555 ntTSL 411.72□□□□□ -0.536e-6■■■□□ 17.4
LARP4Q71RC2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.39□□□□□ -0.274e-17■■■□□ 17.4
LARP4Q71RC2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.036e-7■■■□□ 17.4
LARP4Q71RC2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.55■□□□□ 0.883e-7■■■□□ 17.4
LARP4Q71RC2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.26□□□□□ -0.294e-7■■■□□ 17.4
LARP4Q71RC2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.193e-11■■■□□ 17.4
LARP4Q71RC2 POLR2E-208ENST00000591709 685 ntTSL 215.12■□□□□ 0.015e-7■■■□□ 17.4
LARP4Q71RC2 POLR2E-212ENST00000614705 589 ntTSL 414.67□□□□□ -0.065e-7■■■□□ 17.4
LARP4Q71RC2 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.212e-6■■■□□ 17.4
LARP4Q71RC2 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.222e-6■■■□□ 17.4
LARP4Q71RC2 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC11□□□□□ -0.652e-6■■■□□ 17.4
LARP4Q71RC2 XRCC6-204ENST00000405506 1958 ntTSL 5 BASIC10.4□□□□□ -0.742e-6■■■□□ 17.4
LARP4Q71RC2 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.762e-6■■■□□ 17.4
LARP4Q71RC2 XRCC6-203ENST00000402580 2006 ntTSL 2 BASIC10.03□□□□□ -0.82e-6■■■□□ 17.4
LARP4Q71RC2 PSMA7-204ENST00000442551 685 ntTSL 314.15□□□□□ -0.142e-9■■■□□ 17.4
LARP4Q71RC2 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.373e-7■■■□□ 17.4
LARP4Q71RC2 POLR2G-202ENST00000524819 1053 ntTSL 312.03□□□□□ -0.483e-7■■■□□ 17.4
LARP4Q71RC2 POLR2G-203ENST00000525455 919 ntTSL 311.88□□□□□ -0.513e-7■■■□□ 17.4
LARP4Q71RC2 POLR2G-206ENST00000531944 1556 ntTSL 510.76□□□□□ -0.693e-7■■■□□ 17.4
LARP4Q71RC2 POLR2G-205ENST00000527435 868 ntTSL 28.73□□□□□ -1.013e-7■■■□□ 17.4
LARP4Q71RC2 POLR2G-204ENST00000526368 710 ntTSL 26.06□□□□□ -1.443e-7■■■□□ 17.4
LARP4Q71RC2 CALM2-202ENST00000409563 770 ntTSL 5 BASIC8.76□□□□□ -1.017e-7■■■□□ 17.4
LARP4Q71RC2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.27■□□□□ 0.676e-7■■■□□ 17.4
LARP4Q71RC2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.27■□□□□ 0.676e-7■■■□□ 17.4
LARP4Q71RC2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.36e-7■■■□□ 17.4
LARP4Q71RC2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.44■□□□□ 0.226e-7■■■□□ 17.4
LARP4Q71RC2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.6■□□□□ 0.096e-7■■■□□ 17.4
LARP4Q71RC2 ATP6V0E2-206ENST00000471877 1766 ntTSL 213.86□□□□□ -0.196e-7■■■□□ 17.4
LARP4Q71RC2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.62□□□□□ -0.236e-7■■■□□ 17.4
LARP4Q71RC2 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC11.99□□□□□ -0.491e-323■■■□□ 17.4
LARP4Q71RC2 UBL5-203ENST00000588141 573 ntTSL 419.49■□□□□ 0.711e-8■■■□□ 17.4
LARP4Q71RC2 NDUFS7-212ENST00000540530 1707 ntTSL 218.83■□□□□ 0.612e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-213ENST00000543289 3356 ntTSL 218.1■□□□□ 0.492e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.67■□□□□ 0.422e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-220ENST00000622587 802 ntTSL 516.53■□□□□ 0.242e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-215ENST00000546172 869 ntTSL 516.07■□□□□ 0.162e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.162e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.35□□□□□ -0.112e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.11□□□□□ -0.152e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-206ENST00000535382 3050 ntTSL 214□□□□□ -0.172e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-214ENST00000545446 3089 ntTSL 213.91□□□□□ -0.182e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-205ENST00000534853 745 ntTSL 513.8□□□□□ -0.22e-6■■■□□ 17.4
LARP4Q71RC2 NDUFS7-217ENST00000591358 3743 nt12.9□□□□□ -0.342e-6■■■□□ 17.4
LARP4Q71RC2 CPED1-209ENST00000520801 553 ntTSL 410.32□□□□□ -0.769e-10■■■□□ 17.3
LARP4Q71RC2 CPED1-204ENST00000428526 2219 ntTSL 27.38□□□□□ -1.239e-10■■■□□ 17.3
LARP4Q71RC2 CPED1-205ENST00000443817 1118 ntTSL 1 (best)5.56□□□□□ -1.529e-10■■■□□ 17.3
LARP4Q71RC2 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.421e-6■■■□□ 17.3
Retrieved 100 of 15,922 protein–RNA pairs in 129.1 ms