RNA–Protein interactions for RNA: ENST00000569304.1

RAB11A-208, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB11A, Length 347 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-208ENST00000569304 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
RAB11A-208ENST00000569304 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
RAB11A-208ENST00000569304 SENP3Q9H4L4 574 aaPredicted RBP18.12■□□□□ 0.49
RAB11A-208ENST00000569304 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
RAB11A-208ENST00000569304 FOXD1Q16676 465 aa16.87■□□□□ 0.29
RAB11A-208ENST00000569304 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
RAB11A-208ENST00000569304 MSH5O43196 834 aa16.04■□□□□ 0.16
RAB11A-208ENST00000569304 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
RAB11A-208ENST00000569304 PLPPR3Q6T4P5 718 aa15.5■□□□□ 0.07
RAB11A-208ENST00000569304 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
RAB11A-208ENST00000569304 ADRA2BP18089 450 aa15.36■□□□□ 0.05
RAB11A-208ENST00000569304 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
RAB11A-208ENST00000569304 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
RAB11A-208ENST00000569304 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
RAB11A-208ENST00000569304 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
RAB11A-208ENST00000569304 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
RAB11A-208ENST00000569304 KCNA4P22459 653 aa13.72□□□□□ -0.21
RAB11A-208ENST00000569304 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
RAB11A-208ENST00000569304 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
RAB11A-208ENST00000569304 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
RAB11A-208ENST00000569304 C1QBPQ07021 282 aaKnown RBP13.42□□□□□ -0.26
RAB11A-208ENST00000569304 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
RAB11A-208ENST00000569304 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
RAB11A-208ENST00000569304 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
RAB11A-208ENST00000569304 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
RAB11A-208ENST00000569304 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
RAB11A-208ENST00000569304 SLC4A1APQ9BWU0 796 aaKnown RBP13.12□□□□□ -0.31
RAB11A-208ENST00000569304 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
RAB11A-208ENST00000569304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAB11A-208ENST00000569304 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
RAB11A-208ENST00000569304 POTEHQ6S545 545 aa12.76□□□□□ -0.37
RAB11A-208ENST00000569304 ZBTB22O15209 634 aa12.66□□□□□ -0.38
RAB11A-208ENST00000569304 CAPN15O75808 1086 aa12.6□□□□□ -0.39
RAB11A-208ENST00000569304 DSG3P32926 999 aa12.58□□□□□ -0.4
RAB11A-208ENST00000569304 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
RAB11A-208ENST00000569304 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
RAB11A-208ENST00000569304 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
RAB11A-208ENST00000569304 APLP2Q06481 763 aa12.31□□□□□ -0.44
RAB11A-208ENST00000569304 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
RAB11A-208ENST00000569304 TRHP20396 242 aaPredicted RBP12.29□□□□□ -0.44
RAB11A-208ENST00000569304 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
RAB11A-208ENST00000569304 ABCB7O75027 752 aa12.24□□□□□ -0.45
RAB11A-208ENST00000569304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
RAB11A-208ENST00000569304 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
RAB11A-208ENST00000569304 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
RAB11A-208ENST00000569304 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
RAB11A-208ENST00000569304 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
RAB11A-208ENST00000569304 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
RAB11A-208ENST00000569304 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
RAB11A-208ENST00000569304 POLA2Q14181 598 aa11.84□□□□□ -0.51
RAB11A-208ENST00000569304 SP7Q8TDD2 431 aaPredicted RBP11.76□□□□□ -0.53
RAB11A-208ENST00000569304 ATF5Q9Y2D1 282 aaPredicted RBP11.75□□□□□ -0.53
RAB11A-208ENST00000569304 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
RAB11A-208ENST00000569304 FKBP8Q14318 412 aa11.62□□□□□ -0.55
RAB11A-208ENST00000569304 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
RAB11A-208ENST00000569304 REM2Q8IYK8 340 aaPredicted RBP11.56□□□□□ -0.56
RAB11A-208ENST00000569304 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
RAB11A-208ENST00000569304 HAX1O00165 279 aa11.54□□□□□ -0.56
RAB11A-208ENST00000569304 OSCARQ8IYS5 282 aa11.46□□□□□ -0.57
RAB11A-208ENST00000569304 PITPNM1O00562 1244 aa11.42□□□□□ -0.58
RAB11A-208ENST00000569304 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
RAB11A-208ENST00000569304 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
RAB11A-208ENST00000569304 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
RAB11A-208ENST00000569304 MKRN4PQ13434 485 aaPredicted RBP11.28□□□□□ -0.6
RAB11A-208ENST00000569304 EVX2Q03828 476 aa11.25□□□□□ -0.61
RAB11A-208ENST00000569304 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
RAB11A-208ENST00000569304 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
RAB11A-208ENST00000569304 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
RAB11A-208ENST00000569304 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
RAB11A-208ENST00000569304 FBLN2P98095 1184 aa11.18□□□□□ -0.62
RAB11A-208ENST00000569304 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
RAB11A-208ENST00000569304 PROM2Q8N271 834 aa11.15□□□□□ -0.62
RAB11A-208ENST00000569304 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
RAB11A-208ENST00000569304 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
RAB11A-208ENST00000569304 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
RAB11A-208ENST00000569304 C19orf67A6NJJ6 358 aa11.06□□□□□ -0.64
RAB11A-208ENST00000569304 LHX8Q68G74 356 aa11.04□□□□□ -0.64
RAB11A-208ENST00000569304 GABBR2O75899 941 aa11.03□□□□□ -0.64
RAB11A-208ENST00000569304 SLC24A1O60721 1099 aa11□□□□□ -0.65
RAB11A-208ENST00000569304 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
RAB11A-208ENST00000569304 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
RAB11A-208ENST00000569304 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
RAB11A-208ENST00000569304 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
RAB11A-208ENST00000569304 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
RAB11A-208ENST00000569304 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
RAB11A-208ENST00000569304 PABPN1Q86U42 306 aaKnown RBP eCLIP10.79□□□□□ -0.68
RAB11A-208ENST00000569304 CD44P16070 742 aaKnown RBP10.78□□□□□ -0.68
RAB11A-208ENST00000569304 CLCN6P51797 869 aa10.78□□□□□ -0.68
RAB11A-208ENST00000569304 PLSCR2Q9NRY7 297 aa10.74□□□□□ -0.69
RAB11A-208ENST00000569304 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
RAB11A-208ENST00000569304 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
RAB11A-208ENST00000569304 DCBLD2Q96PD2 775 aa10.71□□□□□ -0.69
RAB11A-208ENST00000569304 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
RAB11A-208ENST00000569304 PKD2Q13563 968 aa10.66□□□□□ -0.7
RAB11A-208ENST00000569304 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
RAB11A-208ENST00000569304 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
RAB11A-208ENST00000569304 PLCD3Q8N3E9 789 aa10.58□□□□□ -0.72
RAB11A-208ENST00000569304 ZNF579Q8NAF0 562 aaKnown RBP10.57□□□□□ -0.72
RAB11A-208ENST00000569304 ZRANB1Q9UGI0 708 aa10.57□□□□□ -0.72
RAB11A-208ENST00000569304 MIER1Q8N108 512 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms