Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC58Q4VC31 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 AC055733.4-201ENST00000638462 1354 ntBASIC18.27■□□□□ 0.51
CCDC58Q4VC31 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC58Q4VC31 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC58Q4VC31 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC58Q4VC31 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 BX842568.3-201ENST00000418104 571 ntBASIC18.24■□□□□ 0.51
CCDC58Q4VC31 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 FP700111.2-201ENST00000619190 1892 ntBASIC18.24■□□□□ 0.51
CCDC58Q4VC31 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 AC011484.1-201ENST00000377652 1995 ntBASIC18.24■□□□□ 0.51
CCDC58Q4VC31 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC58Q4VC31 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 BX005040.4-201ENST00000637145 1518 ntBASIC18.23■□□□□ 0.51
CCDC58Q4VC31 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 MIR4466-201ENST00000606121 54 ntBASIC18.23■□□□□ 0.51
CCDC58Q4VC31 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC58Q4VC31 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms