Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCDQ05655 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRKCDQ05655 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PRKCDQ05655 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
PRKCDQ05655 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.85■□□□□ 0.61
PRKCDQ05655 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.85■□□□□ 0.61
PRKCDQ05655 AL358852.1-201ENST00000623174 1268 ntBASIC18.85■□□□□ 0.61
PRKCDQ05655 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PRKCDQ05655 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PRKCDQ05655 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.85■□□□□ 0.61
PRKCDQ05655 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRKCDQ05655 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PRKCDQ05655 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.85■□□□□ 0.61
PRKCDQ05655 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.84■□□□□ 0.61
PRKCDQ05655 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.84■□□□□ 0.61
PRKCDQ05655 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PRKCDQ05655 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PRKCDQ05655 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.84■□□□□ 0.61
PRKCDQ05655 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PRKCDQ05655 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PRKCDQ05655 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRKCDQ05655 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.83■□□□□ 0.61
PRKCDQ05655 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRKCDQ05655 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRKCDQ05655 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.83■□□□□ 0.61
PRKCDQ05655 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PRKCDQ05655 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRKCDQ05655 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.83■□□□□ 0.6
PRKCDQ05655 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.83■□□□□ 0.6
PRKCDQ05655 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.83■□□□□ 0.6
PRKCDQ05655 AL139246.5-201ENST00000606645 996 ntBASIC18.83■□□□□ 0.6
PRKCDQ05655 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCDQ05655 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.83■□□□□ 0.6
PRKCDQ05655 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCDQ05655 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PRKCDQ05655 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PRKCDQ05655 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKCDQ05655 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRKCDQ05655 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.83■□□□□ 0.6
PRKCDQ05655 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PRKCDQ05655 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
PRKCDQ05655 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PRKCDQ05655 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRKCDQ05655 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.82■□□□□ 0.6
PRKCDQ05655 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.82■□□□□ 0.6
PRKCDQ05655 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
PRKCDQ05655 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.82■□□□□ 0.6
PRKCDQ05655 AC011484.1-201ENST00000377652 1995 ntBASIC18.82■□□□□ 0.6
PRKCDQ05655 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRKCDQ05655 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.82■□□□□ 0.6
PRKCDQ05655 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.82■□□□□ 0.6
PRKCDQ05655 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PRKCDQ05655 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRKCDQ05655 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 AC027702.1-201ENST00000563810 1770 ntBASIC18.81■□□□□ 0.6
PRKCDQ05655 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.81■□□□□ 0.6
PRKCDQ05655 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.81■□□□□ 0.6
PRKCDQ05655 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKCDQ05655 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.81■□□□□ 0.6
PRKCDQ05655 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCDQ05655 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.8■□□□□ 0.6
PRKCDQ05655 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKCDQ05655 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms