Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRPEP62304 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRPEP62304 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.83■□□□□ 0.13
SNRPEP62304 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.83■□□□□ 0.13
SNRPEP62304 AC090877.2-201ENST00000558441 1738 ntBASIC15.83■□□□□ 0.13
SNRPEP62304 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRPEP62304 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
SNRPEP62304 MIR6090-201ENST00000622481 60 ntBASIC15.83■□□□□ 0.12
SNRPEP62304 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPEP62304 AC026471.6-201ENST00000622954 1905 ntBASIC15.83■□□□□ 0.12
SNRPEP62304 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SNRPEP62304 PLK5-205ENST00000642079 1969 ntBASIC15.83■□□□□ 0.12
SNRPEP62304 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPEP62304 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPEP62304 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPEP62304 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPEP62304 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.83■□□□□ 0.12
SNRPEP62304 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPEP62304 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNRPEP62304 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.83■□□□□ 0.12
SNRPEP62304 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 LINC01960-201ENST00000563759 1884 ntBASIC15.82■□□□□ 0.12
SNRPEP62304 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SNRPEP62304 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC15.82■□□□□ 0.12
SNRPEP62304 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.82■□□□□ 0.12
SNRPEP62304 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.82■□□□□ 0.12
SNRPEP62304 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.82■□□□□ 0.12
SNRPEP62304 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SNRPEP62304 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.82■□□□□ 0.12
SNRPEP62304 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SNRPEP62304 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.81■□□□□ 0.12
SNRPEP62304 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.81■□□□□ 0.12
SNRPEP62304 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.81■□□□□ 0.12
SNRPEP62304 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SNRPEP62304 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.81■□□□□ 0.12
SNRPEP62304 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.81■□□□□ 0.12
SNRPEP62304 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SNRPEP62304 AL022069.1-201ENST00000568025 1636 ntBASIC15.81■□□□□ 0.12
SNRPEP62304 AC104564.3-201ENST00000582367 638 ntBASIC15.81■□□□□ 0.12
SNRPEP62304 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.81■□□□□ 0.12
SNRPEP62304 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SNRPEP62304 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPEP62304 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.8■□□□□ 0.12
SNRPEP62304 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPEP62304 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPEP62304 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SNRPEP62304 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC15.8■□□□□ 0.12
SNRPEP62304 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SNRPEP62304 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.8■□□□□ 0.12
SNRPEP62304 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.8■□□□□ 0.12
SNRPEP62304 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SNRPEP62304 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
SNRPEP62304 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.79■□□□□ 0.12
SNRPEP62304 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC15.79■□□□□ 0.12
SNRPEP62304 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.79■□□□□ 0.12
SNRPEP62304 AC124067.4-201ENST00000519691 2379 ntBASIC15.79■□□□□ 0.12
SNRPEP62304 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SNRPEP62304 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRPEP62304 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SNRPEP62304 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.79■□□□□ 0.12
SNRPEP62304 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.79■□□□□ 0.12
SNRPEP62304 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms