Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC020907.5-201ENST00000624372 1936 ntBASIC25.12■■□□□ 1.61
PDE1AP54750 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.12■■□□□ 1.61
PDE1AP54750 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 AL591742.1-201ENST00000604433 565 ntBASIC25.12■■□□□ 1.61
PDE1AP54750 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE1AP54750 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.12■■□□□ 1.61
PDE1AP54750 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDE1AP54750 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDE1AP54750 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.11■■□□□ 1.61
PDE1AP54750 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
PDE1AP54750 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.11■■□□□ 1.61
PDE1AP54750 CDV3P1-201ENST00000471403 739 ntBASIC25.11■■□□□ 1.61
PDE1AP54750 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.11■■□□□ 1.61
PDE1AP54750 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
PDE1AP54750 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDE1AP54750 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE1AP54750 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC25.1■■□□□ 1.61
PDE1AP54750 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PDE1AP54750 AC073130.3-201ENST00000624389 2278 ntBASIC25.1■■□□□ 1.61
PDE1AP54750 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.1■■□□□ 1.61
PDE1AP54750 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PDE1AP54750 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE1AP54750 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE1AP54750 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PDE1AP54750 AC016405.3-201ENST00000607710 860 ntBASIC25.1■■□□□ 1.61
PDE1AP54750 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.1■■□□□ 1.61
PDE1AP54750 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE1AP54750 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE1AP54750 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.09■■□□□ 1.61
PDE1AP54750 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE1AP54750 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PDE1AP54750 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PDE1AP54750 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE1AP54750 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
PDE1AP54750 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE1AP54750 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE1AP54750 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PDE1AP54750 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PDE1AP54750 BID-214ENST00000617586 542 ntTSL 5 BASIC25.09■■□□□ 1.61
PDE1AP54750 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.09■■□□□ 1.61
PDE1AP54750 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE1AP54750 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE1AP54750 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.09■■□□□ 1.61
PDE1AP54750 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
PDE1AP54750 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.09■■□□□ 1.61
PDE1AP54750 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDE1AP54750 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.08■■□□□ 1.61
PDE1AP54750 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDE1AP54750 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDE1AP54750 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.08■■□□□ 1.61
PDE1AP54750 AL162412.1-201ENST00000567129 965 ntBASIC25.08■■□□□ 1.61
PDE1AP54750 FAM21FP-204ENST00000608637 956 ntBASIC25.08■■□□□ 1.61
PDE1AP54750 IKBKGP1-201ENST00000612193 1073 ntBASIC25.08■■□□□ 1.61
PDE1AP54750 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.08■■□□□ 1.61
PDE1AP54750 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
PDE1AP54750 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDE1AP54750 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDE1AP54750 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
PDE1AP54750 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
PDE1AP54750 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.07■■□□□ 1.6
PDE1AP54750 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.07■■□□□ 1.6
PDE1AP54750 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.07■■□□□ 1.6
PDE1AP54750 AC068338.2-201ENST00000563278 1430 ntBASIC25.07■■□□□ 1.6
PDE1AP54750 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25.07■■□□□ 1.6
PDE1AP54750 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.07■■□□□ 1.6
PDE1AP54750 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.07■■□□□ 1.6
PDE1AP54750 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.07■■□□□ 1.6
PDE1AP54750 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE1AP54750 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
PDE1AP54750 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE1AP54750 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE1AP54750 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.06■■□□□ 1.6
PDE1AP54750 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PDE1AP54750 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.06■■□□□ 1.6
PDE1AP54750 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE1AP54750 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
PDE1AP54750 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE1AP54750 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.06■■□□□ 1.6
PDE1AP54750 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.06■■□□□ 1.6
PDE1AP54750 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE1AP54750 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.06■■□□□ 1.6
PDE1AP54750 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE1AP54750 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE1AP54750 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms