Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCK1P35558 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.54■■□□□ 1.04
PCK1P35558 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.54■■□□□ 1.04
PCK1P35558 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
PCK1P35558 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PCK1P35558 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.54■■□□□ 1.04
PCK1P35558 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.54■■□□□ 1.04
PCK1P35558 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.54■■□□□ 1.04
PCK1P35558 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.54■■□□□ 1.04
PCK1P35558 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCK1P35558 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCK1P35558 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.53■■□□□ 1.04
PCK1P35558 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCK1P35558 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.53■■□□□ 1.04
PCK1P35558 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.53■■□□□ 1.04
PCK1P35558 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.53■■□□□ 1.04
PCK1P35558 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.53■■□□□ 1.04
PCK1P35558 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.53■■□□□ 1.04
PCK1P35558 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PCK1P35558 FEM1AP1-201ENST00000431297 1995 ntBASIC21.53■■□□□ 1.04
PCK1P35558 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.53■■□□□ 1.04
PCK1P35558 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCK1P35558 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 AC007225.1-201ENST00000566331 1836 ntBASIC21.52■■□□□ 1.04
PCK1P35558 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.52■■□□□ 1.04
PCK1P35558 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 AC116050.2-201ENST00000612102 1779 ntBASIC21.52■■□□□ 1.04
PCK1P35558 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.52■■□□□ 1.04
PCK1P35558 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.52■■□□□ 1.04
PCK1P35558 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.52■■□□□ 1.04
PCK1P35558 UBE2DNL-204ENST00000602536 740 ntBASIC21.52■■□□□ 1.04
PCK1P35558 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCK1P35558 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCK1P35558 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCK1P35558 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.52■■□□□ 1.03
PCK1P35558 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.51■■□□□ 1.03
PCK1P35558 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.51■■□□□ 1.03
PCK1P35558 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.51■■□□□ 1.03
PCK1P35558 RARRES2P6-201ENST00000567333 442 ntBASIC21.51■■□□□ 1.03
PCK1P35558 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 MYCNOS-205ENST00000641950 531 ntBASIC21.51■■□□□ 1.03
PCK1P35558 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCK1P35558 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
PCK1P35558 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCK1P35558 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PCK1P35558 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCK1P35558 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCK1P35558 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCK1P35558 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCK1P35558 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCK1P35558 AC091799.1-201ENST00000422823 811 ntBASIC21.5■■□□□ 1.03
PCK1P35558 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.5■■□□□ 1.03
PCK1P35558 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.5■■□□□ 1.03
PCK1P35558 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.5■■□□□ 1.03
PCK1P35558 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCK1P35558 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCK1P35558 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCK1P35558 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
PCK1P35558 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCK1P35558 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.49■■□□□ 1.03
PCK1P35558 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCK1P35558 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCK1P35558 KRT18P5-201ENST00000436075 1291 ntBASIC21.49■■□□□ 1.03
PCK1P35558 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PCK1P35558 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCK1P35558 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCK1P35558 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.49■■□□□ 1.03
PCK1P35558 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
PCK1P35558 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCK1P35558 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms