Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ATF4P18848 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATF4P18848 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF4P18848 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATF4P18848 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF4P18848 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ATF4P18848 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF4P18848 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
ATF4P18848 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.06■□□□□ 0.32
ATF4P18848 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.06■□□□□ 0.32
ATF4P18848 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
ATF4P18848 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.06■□□□□ 0.32
ATF4P18848 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.06■□□□□ 0.32
ATF4P18848 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATF4P18848 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATF4P18848 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ATF4P18848 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 AC012313.1-201ENST00000593393 3059 ntBASIC17.05■□□□□ 0.32
ATF4P18848 AC011270.2-201ENST00000624293 2550 ntBASIC17.05■□□□□ 0.32
ATF4P18848 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
ATF4P18848 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.05■□□□□ 0.32
ATF4P18848 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.05■□□□□ 0.32
ATF4P18848 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.05■□□□□ 0.32
ATF4P18848 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.05■□□□□ 0.32
ATF4P18848 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ATF4P18848 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF4P18848 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
ATF4P18848 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.04■□□□□ 0.32
ATF4P18848 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.04■□□□□ 0.32
ATF4P18848 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 Z98882.1-201ENST00000622160 2253 ntBASIC17.04■□□□□ 0.32
ATF4P18848 AC116562.4-201ENST00000641316 2276 ntBASIC17.04■□□□□ 0.32
ATF4P18848 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.04■□□□□ 0.32
ATF4P18848 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 AL353803.4-201ENST00000565882 1934 ntBASIC17.04■□□□□ 0.32
ATF4P18848 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF4P18848 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF4P18848 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms