Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.93■□□□□ 0.62
UBL4AP11441 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.93■□□□□ 0.62
UBL4AP11441 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.93■□□□□ 0.62
UBL4AP11441 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.93■□□□□ 0.62
UBL4AP11441 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
UBL4AP11441 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBL4AP11441 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBL4AP11441 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBL4AP11441 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.92■□□□□ 0.62
UBL4AP11441 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.92■□□□□ 0.62
UBL4AP11441 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.92■□□□□ 0.62
UBL4AP11441 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.92■□□□□ 0.62
UBL4AP11441 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBL4AP11441 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.92■□□□□ 0.62
UBL4AP11441 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.92■□□□□ 0.62
UBL4AP11441 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBL4AP11441 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.91■□□□□ 0.62
UBL4AP11441 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.91■□□□□ 0.62
UBL4AP11441 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
UBL4AP11441 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.91■□□□□ 0.62
UBL4AP11441 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.91■□□□□ 0.62
UBL4AP11441 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UBL4AP11441 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UBL4AP11441 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBL4AP11441 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UBL4AP11441 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UBL4AP11441 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.91■□□□□ 0.62
UBL4AP11441 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.91■□□□□ 0.62
UBL4AP11441 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.91■□□□□ 0.62
UBL4AP11441 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UBL4AP11441 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UBL4AP11441 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBL4AP11441 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.9■□□□□ 0.62
UBL4AP11441 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.9■□□□□ 0.62
UBL4AP11441 AC010536.3-201ENST00000620306 533 ntBASIC18.9■□□□□ 0.62
UBL4AP11441 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.9■□□□□ 0.62
UBL4AP11441 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
UBL4AP11441 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 AC116050.2-201ENST00000612102 1779 ntBASIC18.9■□□□□ 0.62
UBL4AP11441 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
UBL4AP11441 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
UBL4AP11441 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBL4AP11441 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
UBL4AP11441 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
UBL4AP11441 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBL4AP11441 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 AC091799.1-201ENST00000422823 811 ntBASIC18.89■□□□□ 0.61
UBL4AP11441 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.89■□□□□ 0.61
UBL4AP11441 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
UBL4AP11441 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.89■□□□□ 0.61
UBL4AP11441 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBL4AP11441 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms