Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 OR10C1-204ENST00000622521 1039 ntBASIC21.47■■□□□ 1.03
APOEP02649 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.47■■□□□ 1.03
APOEP02649 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APOEP02649 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.47■■□□□ 1.03
APOEP02649 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APOEP02649 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.47■■□□□ 1.03
APOEP02649 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
APOEP02649 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APOEP02649 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.47■■□□□ 1.03
APOEP02649 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
APOEP02649 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APOEP02649 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APOEP02649 AC116050.2-201ENST00000612102 1779 ntBASIC21.46■■□□□ 1.03
APOEP02649 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.46■■□□□ 1.03
APOEP02649 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
APOEP02649 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
APOEP02649 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.46■■□□□ 1.03
APOEP02649 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
APOEP02649 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APOEP02649 GPX1P1-201ENST00000388829 606 ntBASIC21.46■■□□□ 1.03
APOEP02649 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
APOEP02649 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.46■■□□□ 1.03
APOEP02649 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.46■■□□□ 1.03
APOEP02649 AC016405.3-201ENST00000607710 860 ntBASIC21.46■■□□□ 1.03
APOEP02649 FAM21FP-204ENST00000608637 956 ntBASIC21.46■■□□□ 1.03
APOEP02649 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.46■■□□□ 1.03
APOEP02649 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
APOEP02649 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
APOEP02649 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APOEP02649 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.46■■□□□ 1.03
APOEP02649 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
APOEP02649 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.45■■□□□ 1.02
APOEP02649 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 ID1-201ENST00000376105 1233 ntBASIC21.45■■□□□ 1.02
APOEP02649 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.45■■□□□ 1.02
APOEP02649 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.45■■□□□ 1.02
APOEP02649 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 RARRES2P4-201ENST00000514074 484 ntBASIC21.45■■□□□ 1.02
APOEP02649 AC105036.2-201ENST00000569468 176 ntBASIC21.45■■□□□ 1.02
APOEP02649 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
APOEP02649 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 AL049796.1-201ENST00000565336 1766 ntBASIC21.45■■□□□ 1.02
APOEP02649 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.45■■□□□ 1.02
APOEP02649 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APOEP02649 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.44■■□□□ 1.02
APOEP02649 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.44■■□□□ 1.02
APOEP02649 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.44■■□□□ 1.02
APOEP02649 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.44■■□□□ 1.02
APOEP02649 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
APOEP02649 AC083906.2-201ENST00000511578 360 ntBASIC21.44■■□□□ 1.02
APOEP02649 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.44■■□□□ 1.02
APOEP02649 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.44■■□□□ 1.02
APOEP02649 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
APOEP02649 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.44■■□□□ 1.02
APOEP02649 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
APOEP02649 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.44■■□□□ 1.02
APOEP02649 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.43■■□□□ 1.02
APOEP02649 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.43■■□□□ 1.02
APOEP02649 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.43■■□□□ 1.02
APOEP02649 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.43■■□□□ 1.02
APOEP02649 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.43■■□□□ 1.02
APOEP02649 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.43■■□□□ 1.02
APOEP02649 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.43■■□□□ 1.02
APOEP02649 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
APOEP02649 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.43■■□□□ 1.02
APOEP02649 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
APOEP02649 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.42■■□□□ 1.02
APOEP02649 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.42■■□□□ 1.02
APOEP02649 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.42■■□□□ 1.02
APOEP02649 HLA-L-209ENST00000420110 1011 ntBASIC21.42■■□□□ 1.02
APOEP02649 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
APOEP02649 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
APOEP02649 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
APOEP02649 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
APOEP02649 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
APOEP02649 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms