Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.19■□□□□ 0.82
EDF1O60869 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EDF1O60869 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
EDF1O60869 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EDF1O60869 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EDF1O60869 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EDF1O60869 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
EDF1O60869 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.18■□□□□ 0.82
EDF1O60869 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
EDF1O60869 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.18■□□□□ 0.82
EDF1O60869 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
EDF1O60869 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.18■□□□□ 0.82
EDF1O60869 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.18■□□□□ 0.82
EDF1O60869 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EDF1O60869 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.18■□□□□ 0.82
EDF1O60869 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.17■□□□□ 0.82
EDF1O60869 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.17■□□□□ 0.82
EDF1O60869 AL138724.1-201ENST00000606771 1088 ntBASIC20.17■□□□□ 0.82
EDF1O60869 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
EDF1O60869 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 AC005332.7-201ENST00000614046 2005 ntBASIC20.17■□□□□ 0.82
EDF1O60869 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
EDF1O60869 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EDF1O60869 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
EDF1O60869 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.16■□□□□ 0.82
EDF1O60869 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.16■□□□□ 0.82
EDF1O60869 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.16■□□□□ 0.82
EDF1O60869 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.16■□□□□ 0.82
EDF1O60869 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.16■□□□□ 0.82
EDF1O60869 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.16■□□□□ 0.82
EDF1O60869 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.16■□□□□ 0.82
EDF1O60869 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.16■□□□□ 0.82
EDF1O60869 AL356740.2-201ENST00000601559 647 ntBASIC20.16■□□□□ 0.82
EDF1O60869 AC136469.2-201ENST00000623944 1028 ntBASIC20.16■□□□□ 0.82
EDF1O60869 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
EDF1O60869 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.16■□□□□ 0.82
EDF1O60869 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EDF1O60869 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 SERBP1P1-201ENST00000396021 1160 ntBASIC20.15■□□□□ 0.82
EDF1O60869 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.15■□□□□ 0.82
EDF1O60869 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.15■□□□□ 0.82
EDF1O60869 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
EDF1O60869 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
EDF1O60869 AC009237.3-201ENST00000393279 1427 ntBASIC20.15■□□□□ 0.82
EDF1O60869 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.15■□□□□ 0.82
EDF1O60869 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.15■□□□□ 0.82
EDF1O60869 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.15■□□□□ 0.82
EDF1O60869 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EDF1O60869 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
EDF1O60869 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
EDF1O60869 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms