Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC020907.5-201ENST00000624372 1936 ntBASIC19.47■□□□□ 0.71
UPK1AO00322 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UPK1AO00322 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UPK1AO00322 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1AO00322 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
UPK1AO00322 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1AO00322 KRT16P2-201ENST00000414673 1423 ntBASIC19.46■□□□□ 0.71
UPK1AO00322 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.46■□□□□ 0.71
UPK1AO00322 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1AO00322 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
UPK1AO00322 AC034268.1-201ENST00000441047 882 ntBASIC19.46■□□□□ 0.71
UPK1AO00322 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1AO00322 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.46■□□□□ 0.71
UPK1AO00322 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.46■□□□□ 0.71
UPK1AO00322 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
UPK1AO00322 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1AO00322 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK1AO00322 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
UPK1AO00322 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.46■□□□□ 0.71
UPK1AO00322 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPK1AO00322 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK1AO00322 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.45■□□□□ 0.7
UPK1AO00322 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.45■□□□□ 0.7
UPK1AO00322 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UPK1AO00322 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK1AO00322 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 AL162377.1-201ENST00000618844 1793 ntBASIC19.45■□□□□ 0.7
UPK1AO00322 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UPK1AO00322 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.45■□□□□ 0.7
UPK1AO00322 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.45■□□□□ 0.7
UPK1AO00322 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UPK1AO00322 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK1AO00322 SLC7A5P2-201ENST00000553010 536 ntBASIC19.45■□□□□ 0.7
UPK1AO00322 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK1AO00322 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
UPK1AO00322 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK1AO00322 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1AO00322 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.44■□□□□ 0.7
UPK1AO00322 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1AO00322 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UPK1AO00322 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1AO00322 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.44■□□□□ 0.7
UPK1AO00322 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1AO00322 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.44■□□□□ 0.7
UPK1AO00322 AC120498.10-201ENST00000621827 505 ntBASIC19.44■□□□□ 0.7
UPK1AO00322 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1AO00322 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1AO00322 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK1AO00322 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
UPK1AO00322 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
UPK1AO00322 KRT19P1-201ENST00000405746 1186 ntBASIC19.43■□□□□ 0.7
UPK1AO00322 AC026271.2-201ENST00000428091 497 ntBASIC19.43■□□□□ 0.7
UPK1AO00322 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.43■□□□□ 0.7
UPK1AO00322 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
UPK1AO00322 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UPK1AO00322 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UPK1AO00322 AC112907.3-201ENST00000577781 2400 ntBASIC19.43■□□□□ 0.7
UPK1AO00322 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPK1AO00322 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1AO00322 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1AO00322 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1AO00322 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1AO00322 AC007225.1-201ENST00000566331 1836 ntBASIC19.42■□□□□ 0.7
UPK1AO00322 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1AO00322 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPK1AO00322 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UPK1AO00322 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1AO00322 KRT18P20-201ENST00000548986 1279 ntBASIC19.42■□□□□ 0.7
UPK1AO00322 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1AO00322 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.42■□□□□ 0.7
UPK1AO00322 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.42■□□□□ 0.7
UPK1AO00322 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms