Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 KRT16P3-201ENST00000439127 1283 ntBASIC17.91■□□□□ 0.46
SHISA3A0PJX4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 AL356740.2-201ENST00000601559 647 ntBASIC17.91■□□□□ 0.46
SHISA3A0PJX4 AL512631.2-201ENST00000604634 923 ntBASIC17.91■□□□□ 0.46
SHISA3A0PJX4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 AC136469.2-201ENST00000623944 1028 ntBASIC17.91■□□□□ 0.46
SHISA3A0PJX4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.91■□□□□ 0.46
SHISA3A0PJX4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.9■□□□□ 0.46
SHISA3A0PJX4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHISA3A0PJX4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 AL138724.1-201ENST00000606771 1088 ntBASIC17.89■□□□□ 0.45
SHISA3A0PJX4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHISA3A0PJX4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 AC005332.7-201ENST00000614046 2005 ntBASIC17.88■□□□□ 0.45
SHISA3A0PJX4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.88■□□□□ 0.45
SHISA3A0PJX4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 AC133561.4-201ENST00000566112 224 ntBASIC17.87■□□□□ 0.45
SHISA3A0PJX4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.87■□□□□ 0.45
SHISA3A0PJX4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SHISA3A0PJX4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms