Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
DUXBA0A1W2PPF3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
DUXBA0A1W2PPF3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
DUXBA0A1W2PPF3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 AC005224.4-201ENST00000583262 1652 ntBASIC16.72■□□□□ 0.27
DUXBA0A1W2PPF3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUXBA0A1W2PPF3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUXBA0A1W2PPF3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUXBA0A1W2PPF3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DUXBA0A1W2PPF3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUXBA0A1W2PPF3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUXBA0A1W2PPF3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.68■□□□□ 0.26
DUXBA0A1W2PPF3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DUXBA0A1W2PPF3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms