Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AC008406.3-201ENST00000620001 1374 ntBASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 AC096631.2-201ENST00000436136 790 ntBASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 RASA4CP-201ENST00000424092 1398 ntBASIC15.24■□□□□ 0.03
TRAV21A0A0B4J279 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 POU5F1P4-201ENST00000413175 1085 ntBASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AP001330.3-201ENST00000520123 633 ntBASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AC106739.1-201ENST00000617035 715 ntBASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AL355001.2-201ENST00000620617 1191 ntBASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV21A0A0B4J279 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 AC091305.1-201ENST00000479476 895 ntBASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 AC061975.6-201ENST00000579045 1553 ntBASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV21A0A0B4J279 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 AC012414.1-201ENST00000556676 535 ntBASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 AL121603.2-201ENST00000557373 2117 ntBASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV21A0A0B4J279 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms