Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC120498.8-201ENST00000614275 531 ntBASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 AL023875.1-201ENST00000640777 796 ntBASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC187A0A096LP49 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC187A0A096LP49 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC187A0A096LP49 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC187A0A096LP49 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC187A0A096LP49 C1orf229-201ENST00000623686 2258 ntBASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 AL135905.2-201ENST00000584934 1404 ntBASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 FAM210CP-201ENST00000445714 574 ntBASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 AC005829.2-201ENST00000571422 1056 ntBASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC187A0A096LP49 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 AL390719.1-204ENST00000412397 1219 ntBASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 BX088651.1-201ENST00000540551 451 ntBASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC187A0A096LP49 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 AC110285.5-201ENST00000611501 352 ntBASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 AL049637.2-201ENST00000641778 930 ntBASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC187A0A096LP49 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC187A0A096LP49 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC187A0A096LP49 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC187A0A096LP49 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC187A0A096LP49 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC187A0A096LP49 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms