Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
U3KQE9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
U3KQE9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.68■□□□□ 0.1
U3KQE9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.68■□□□□ 0.1
U3KQE9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.68■□□□□ 0.1
U3KQE9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.68■□□□□ 0.1
U3KQE9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
U3KQE9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
U3KQE9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.67■□□□□ 0.1
U3KQE9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.67■□□□□ 0.1
U3KQE9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
U3KQE9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.67■□□□□ 0.1
U3KQE9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.67■□□□□ 0.1
U3KQE9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.67■□□□□ 0.1
U3KQE9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.67■□□□□ 0.1
U3KQE9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 NTF6G-201ENST00000591094 616 ntBASIC15.67■□□□□ 0.1
U3KQE9 MIR2861-201ENST00000636310 90 ntBASIC15.67■□□□□ 0.1
U3KQE9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
U3KQE9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
U3KQE9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.67■□□□□ 0.1
U3KQE9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
U3KQE9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
U3KQE9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.67■□□□□ 0.1
U3KQE9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
U3KQE9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
U3KQE9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
U3KQE9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.66■□□□□ 0.1
U3KQE9 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.66■□□□□ 0.1
U3KQE9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.66■□□□□ 0.1
U3KQE9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.66■□□□□ 0.1
U3KQE9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
U3KQE9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.66■□□□□ 0.1
U3KQE9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.66■□□□□ 0.1
U3KQE9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
U3KQE9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.66■□□□□ 0.1
U3KQE9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.66■□□□□ 0.1
U3KQE9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
U3KQE9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
U3KQE9 AC092667.1-201ENST00000434301 2586 ntBASIC15.66■□□□□ 0.1
U3KQE9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
U3KQE9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.66■□□□□ 0.1
U3KQE9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
U3KQE9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
U3KQE9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
U3KQE9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
U3KQE9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 UBE2DNL-204ENST00000602536 740 ntBASIC15.65■□□□□ 0.1
U3KQE9 MYCNOS-205ENST00000641950 531 ntBASIC15.65■□□□□ 0.1
U3KQE9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
U3KQE9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.65■□□□□ 0.1
U3KQE9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.65■□□□□ 0.1
U3KQE9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U3KQE9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms