Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 AC103834.1-201ENST00000520383 144 ntBASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 AC004408.2-201ENST00000623613 2777 ntBASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 AC120498.9-201ENST00000339021 3867 ntBASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 NTF6A-201ENST00000591175 560 ntBASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COMMD3Q9UBI1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 TCF3P1-201ENST00000423021 1937 ntBASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD3Q9UBI1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 YBX1P4-201ENST00000392794 808 ntBASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 pRNA.6-201ENST00000610482 90 ntBASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 pRNA.5-201ENST00000612139 90 ntBASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 pRNA.11-201ENST00000618423 90 ntBASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 pRNA.13-201ENST00000619112 90 ntBASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 KRT8P33-201ENST00000508125 1423 ntBASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COMMD3Q9UBI1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 AC020763.4-201ENST00000623414 4170 ntBASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 TNXA-203ENST00000507684 2038 ntBASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 AL158211.5-201ENST00000623583 2518 ntBASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD3Q9UBI1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms