Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SCAF1Q9H7N4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 AC093787.1-201ENST00000450396 207 ntBASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 SNORA78-201ENST00000459373 127 ntBASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 AL359736.2-201ENST00000621992 437 ntBASIC30.47■■■□□ 2.47
SCAF1Q9H7N4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 AC026366.1-201ENST00000488803 879 ntBASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC30.46■■■□□ 2.47
SCAF1Q9H7N4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
SCAF1Q9H7N4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.45■■■□□ 2.46
SCAF1Q9H7N4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 FAM197Y4-202ENST00000622692 608 ntBASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 MYC-209ENST00000641252 345 ntBASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC30.44■■■□□ 2.46
SCAF1Q9H7N4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 AC087289.5-201ENST00000586076 3175 ntBASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.43■■■□□ 2.46
SCAF1Q9H7N4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 AC068338.2-201ENST00000563278 1430 ntBASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 AC016405.3-201ENST00000607710 860 ntBASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SCAF1Q9H7N4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SCAF1Q9H7N4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms