Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.54■□□□□ 0.4
MED28Q9H204 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MED28Q9H204 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MED28Q9H204 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MED28Q9H204 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MED28Q9H204 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MED28Q9H204 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.54■□□□□ 0.4
MED28Q9H204 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MED28Q9H204 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MED28Q9H204 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
MED28Q9H204 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 TCF3P1-201ENST00000423021 1937 ntBASIC17.53■□□□□ 0.4
MED28Q9H204 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.53■□□□□ 0.4
MED28Q9H204 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 AL592293.1-201ENST00000502889 1188 ntBASIC17.53■□□□□ 0.4
MED28Q9H204 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.53■□□□□ 0.4
MED28Q9H204 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.53■□□□□ 0.4
MED28Q9H204 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.53■□□□□ 0.4
MED28Q9H204 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MED28Q9H204 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MED28Q9H204 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MED28Q9H204 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
MED28Q9H204 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MED28Q9H204 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MED28Q9H204 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MED28Q9H204 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MED28Q9H204 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.52■□□□□ 0.4
MED28Q9H204 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MED28Q9H204 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
MED28Q9H204 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MED28Q9H204 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MED28Q9H204 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.52■□□□□ 0.4
MED28Q9H204 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.52■□□□□ 0.4
MED28Q9H204 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.52■□□□□ 0.4
MED28Q9H204 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MED28Q9H204 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MED28Q9H204 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MED28Q9H204 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.52■□□□□ 0.39
MED28Q9H204 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MED28Q9H204 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.51■□□□□ 0.39
MED28Q9H204 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MED28Q9H204 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MED28Q9H204 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MED28Q9H204 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.51■□□□□ 0.39
MED28Q9H204 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
MED28Q9H204 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MED28Q9H204 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
MED28Q9H204 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.5■□□□□ 0.39
MED28Q9H204 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.5■□□□□ 0.39
MED28Q9H204 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
MED28Q9H204 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.5■□□□□ 0.39
MED28Q9H204 AP004607.7-201ENST00000527152 1677 ntBASIC17.5■□□□□ 0.39
MED28Q9H204 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
MED28Q9H204 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.5■□□□□ 0.39
MED28Q9H204 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.5■□□□□ 0.39
MED28Q9H204 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
MED28Q9H204 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MED28Q9H204 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MED28Q9H204 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
MED28Q9H204 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.5■□□□□ 0.39
MED28Q9H204 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MED28Q9H204 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MED28Q9H204 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms