Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF25Q96BH1 AC011484.1-201ENST00000377652 1995 ntBASIC21.54■■□□□ 1.04
RNF25Q96BH1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF25Q96BH1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF25Q96BH1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF25Q96BH1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RNF25Q96BH1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 AC123595.1-201ENST00000440769 1046 ntBASIC21.53■■□□□ 1.04
RNF25Q96BH1 AC010141.2-201ENST00000452426 721 ntBASIC21.53■■□□□ 1.04
RNF25Q96BH1 RARRES2P11-201ENST00000635158 484 ntBASIC21.53■■□□□ 1.04
RNF25Q96BH1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF25Q96BH1 AL391422.3-201ENST00000603791 2761 ntBASIC21.53■■□□□ 1.04
RNF25Q96BH1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF25Q96BH1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 SLC7A5P2-201ENST00000553010 536 ntBASIC21.52■■□□□ 1.04
RNF25Q96BH1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 TERF1P2-201ENST00000583350 1212 ntBASIC21.52■■□□□ 1.04
RNF25Q96BH1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF25Q96BH1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF25Q96BH1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF25Q96BH1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
RNF25Q96BH1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.52■■□□□ 1.03
RNF25Q96BH1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 YBX1P1-201ENST00000445822 960 ntBASIC21.51■■□□□ 1.03
RNF25Q96BH1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 CCDC92B-201ENST00000575506 885 ntBASIC21.51■■□□□ 1.03
RNF25Q96BH1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RNF25Q96BH1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF25Q96BH1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF25Q96BH1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF25Q96BH1 DUX4L2-201ENST00000561772 1275 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms