Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 AL355001.2-201ENST00000620617 1191 ntBASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
DNAAF1Q8NEP3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 RASA4CP-201ENST00000424092 1398 ntBASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 AP001330.3-201ENST00000520123 633 ntBASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DNAAF1Q8NEP3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 MIR572-201ENST00000384983 95 ntBASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 BX005040.4-201ENST00000637145 1518 ntBASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 AC005224.4-201ENST00000583262 1652 ntBASIC18.03■□□□□ 0.48
DNAAF1Q8NEP3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 AC091305.1-201ENST00000479476 895 ntBASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.02■□□□□ 0.48
DNAAF1Q8NEP3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNAAF1Q8NEP3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.02■□□□□ 0.47
DNAAF1Q8NEP3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DNAAF1Q8NEP3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DNAAF1Q8NEP3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DNAAF1Q8NEP3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.02■□□□□ 0.47
DNAAF1Q8NEP3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.02■□□□□ 0.47
DNAAF1Q8NEP3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 AL512408.1-201ENST00000569378 2000 ntBASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 FP700111.2-201ENST00000619190 1892 ntBASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 MIR939-201ENST00000401314 82 ntBASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DNAAF1Q8NEP3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms