Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
LCA10Q71F78 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
LCA10Q71F78 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LCA10Q71F78 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
LCA10Q71F78 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LCA10Q71F78 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
LCA10Q71F78 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LCA10Q71F78 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC11.05□□□□□ -0.64
LCA10Q71F78 AC112907.3-201ENST00000577781 2400 ntBASIC11.05□□□□□ -0.64
LCA10Q71F78 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
LCA10Q71F78 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC11.05□□□□□ -0.64
LCA10Q71F78 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC11.05□□□□□ -0.64
LCA10Q71F78 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC11.05□□□□□ -0.64
LCA10Q71F78 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
LCA10Q71F78 AC120024.1-201ENST00000562672 995 ntBASIC11.05□□□□□ -0.64
LCA10Q71F78 HSD17B1P1-201ENST00000590052 955 ntBASIC11.05□□□□□ -0.64
LCA10Q71F78 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 BHLHE23-202ENST00000612929 1109 ntBASIC11.05□□□□□ -0.64
LCA10Q71F78 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC11.05□□□□□ -0.64
LCA10Q71F78 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LCA10Q71F78 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 AC010542.4-201ENST00000563151 1910 ntBASIC11.05□□□□□ -0.64
LCA10Q71F78 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC11.05□□□□□ -0.64
LCA10Q71F78 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC11.05□□□□□ -0.64
LCA10Q71F78 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
LCA10Q71F78 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LCA10Q71F78 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LCA10Q71F78 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 MST1L-201ENST00000442552 2185 ntBASIC11.04□□□□□ -0.64
LCA10Q71F78 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
LCA10Q71F78 AL353803.4-201ENST00000565882 1934 ntBASIC11.04□□□□□ -0.64
LCA10Q71F78 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC11.04□□□□□ -0.64
LCA10Q71F78 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC11.04□□□□□ -0.64
LCA10Q71F78 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC11.04□□□□□ -0.64
LCA10Q71F78 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC11.04□□□□□ -0.64
LCA10Q71F78 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.04□□□□□ -0.64
LCA10Q71F78 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
LCA10Q71F78 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.04□□□□□ -0.64
LCA10Q71F78 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC11.04□□□□□ -0.64
LCA10Q71F78 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
LCA10Q71F78 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LCA10Q71F78 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 AF131216.4-201ENST00000638924 1588 ntBASIC11.03□□□□□ -0.64
LCA10Q71F78 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LCA10Q71F78 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LCA10Q71F78 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC11.03□□□□□ -0.64
LCA10Q71F78 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 THA1P-201ENST00000590384 1145 ntBASIC11.03□□□□□ -0.64
LCA10Q71F78 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
LCA10Q71F78 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC11.03□□□□□ -0.64
LCA10Q71F78 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LCA10Q71F78 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms