Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SMIM11AP58511 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMIM11AP58511 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM11AP58511 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SMIM11AP58511 POU5F1P4-201ENST00000413175 1085 ntBASIC18.93■□□□□ 0.62
SMIM11AP58511 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM11AP58511 AC008175.2-201ENST00000612840 297 ntBASIC18.93■□□□□ 0.62
SMIM11AP58511 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SMIM11AP58511 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMIM11AP58511 AIRN-201ENST00000601203 4374 ntBASIC18.93■□□□□ 0.62
SMIM11AP58511 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM11AP58511 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM11AP58511 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM11AP58511 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM11AP58511 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.92■□□□□ 0.62
SMIM11AP58511 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.92■□□□□ 0.62
SMIM11AP58511 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SMIM11AP58511 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM11AP58511 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMIM11AP58511 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM11AP58511 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMIM11AP58511 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 AC061975.6-201ENST00000579045 1553 ntBASIC18.91■□□□□ 0.62
SMIM11AP58511 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMIM11AP58511 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.91■□□□□ 0.62
SMIM11AP58511 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.91■□□□□ 0.62
SMIM11AP58511 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.91■□□□□ 0.62
SMIM11AP58511 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.91■□□□□ 0.62
SMIM11AP58511 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.91■□□□□ 0.62
SMIM11AP58511 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMIM11AP58511 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.91■□□□□ 0.62
SMIM11AP58511 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 AC092720.2-201ENST00000602388 1665 ntBASIC18.91■□□□□ 0.62
SMIM11AP58511 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.91■□□□□ 0.62
SMIM11AP58511 AL512408.1-201ENST00000569378 2000 ntBASIC18.91■□□□□ 0.62
SMIM11AP58511 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM11AP58511 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.9■□□□□ 0.62
SMIM11AP58511 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SMIM11AP58511 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM11AP58511 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM11AP58511 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SMIM11AP58511 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM11AP58511 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM11AP58511 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.9■□□□□ 0.62
SMIM11AP58511 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SMIM11AP58511 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SMIM11AP58511 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.9■□□□□ 0.62
SMIM11AP58511 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.9■□□□□ 0.62
SMIM11AP58511 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM11AP58511 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SMIM11AP58511 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM11AP58511 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SMIM11AP58511 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMIM11AP58511 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.9■□□□□ 0.62
SMIM11AP58511 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SMIM11AP58511 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM11AP58511 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SMIM11AP58511 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM11AP58511 EDA-201ENST00000338901 1233 ntBASIC18.89■□□□□ 0.61
SMIM11AP58511 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMIM11AP58511 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.89■□□□□ 0.61
SMIM11AP58511 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.89■□□□□ 0.61
SMIM11AP58511 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.89■□□□□ 0.61
SMIM11AP58511 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM11AP58511 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SMIM11AP58511 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.89■□□□□ 0.61
SMIM11AP58511 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM11AP58511 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.89■□□□□ 0.61
SMIM11AP58511 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM11AP58511 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM11AP58511 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms