Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.56■□□□□ 0.88
THRAP10827 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
THRAP10827 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
THRAP10827 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
THRAP10827 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
THRAP10827 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
THRAP10827 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.55■□□□□ 0.88
THRAP10827 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
THRAP10827 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
THRAP10827 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.55■□□□□ 0.88
THRAP10827 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 DUX4L16-201ENST00000555130 1264 ntBASIC20.55■□□□□ 0.88
THRAP10827 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.55■□□□□ 0.88
THRAP10827 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.55■□□□□ 0.88
THRAP10827 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
THRAP10827 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
THRAP10827 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
THRAP10827 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.54■□□□□ 0.88
THRAP10827 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.54■□□□□ 0.88
THRAP10827 AL049796.1-201ENST00000565336 1766 ntBASIC20.54■□□□□ 0.88
THRAP10827 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
THRAP10827 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
THRAP10827 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
THRAP10827 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 GPX1P1-201ENST00000388829 606 ntBASIC20.54■□□□□ 0.88
THRAP10827 AL355802.2-201ENST00000402069 882 ntBASIC20.54■□□□□ 0.88
THRAP10827 AC010141.2-201ENST00000452426 721 ntBASIC20.54■□□□□ 0.88
THRAP10827 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.54■□□□□ 0.88
THRAP10827 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
THRAP10827 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.54■□□□□ 0.88
THRAP10827 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.54■□□□□ 0.88
THRAP10827 AC138907.5-202ENST00000569484 235 ntBASIC20.54■□□□□ 0.88
THRAP10827 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.54■□□□□ 0.88
THRAP10827 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.54■□□□□ 0.88
THRAP10827 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
THRAP10827 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
THRAP10827 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
THRAP10827 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
THRAP10827 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
THRAP10827 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
THRAP10827 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
THRAP10827 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.53■□□□□ 0.88
THRAP10827 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.53■□□□□ 0.88
THRAP10827 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
THRAP10827 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.53■□□□□ 0.88
THRAP10827 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
THRAP10827 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
THRAP10827 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
THRAP10827 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
THRAP10827 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
THRAP10827 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
THRAP10827 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
THRAP10827 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THRAP10827 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THRAP10827 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THRAP10827 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.52■□□□□ 0.88
THRAP10827 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.52■□□□□ 0.88
THRAP10827 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.52■□□□□ 0.88
THRAP10827 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.52■□□□□ 0.88
THRAP10827 AL050303.2-201ENST00000619798 666 ntBASIC20.52■□□□□ 0.88
THRAP10827 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THRAP10827 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
THRAP10827 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
THRAP10827 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.52■□□□□ 0.88
THRAP10827 AP006587.3-201ENST00000525742 1516 ntBASIC20.52■□□□□ 0.87
THRAP10827 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
THRAP10827 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.52■□□□□ 0.87
THRAP10827 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms