Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.34■■□□□ 1.01
CD48P09326 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.34■■□□□ 1.01
CD48P09326 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.34■■□□□ 1.01
CD48P09326 AC116050.2-201ENST00000612102 1779 ntBASIC21.34■■□□□ 1.01
CD48P09326 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CD48P09326 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.34■■□□□ 1.01
CD48P09326 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.34■■□□□ 1.01
CD48P09326 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.34■■□□□ 1.01
CD48P09326 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.34■■□□□ 1.01
CD48P09326 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 GABARAPL3-202ENST00000624044 1851 ntBASIC21.34■■□□□ 1.01
CD48P09326 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.34■■□□□ 1.01
CD48P09326 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.34■■□□□ 1.01
CD48P09326 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD48P09326 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.33■■□□□ 1.01
CD48P09326 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CD48P09326 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CD48P09326 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CD48P09326 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CD48P09326 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CD48P09326 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.33■■□□□ 1.01
CD48P09326 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.33■■□□□ 1.01
CD48P09326 AC243732.1-201ENST00000612648 864 ntBASIC21.33■■□□□ 1.01
CD48P09326 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.33■■□□□ 1
CD48P09326 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.33■■□□□ 1
CD48P09326 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.33■■□□□ 1
CD48P09326 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.32■■□□□ 1
CD48P09326 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CD48P09326 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.32■■□□□ 1
CD48P09326 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.32■■□□□ 1
CD48P09326 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.32■■□□□ 1
CD48P09326 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.32■■□□□ 1
CD48P09326 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CD48P09326 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD48P09326 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.31■■□□□ 1
CD48P09326 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.31■■□□□ 1
CD48P09326 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.31■■□□□ 1
CD48P09326 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CD48P09326 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.31■■□□□ 1
CD48P09326 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.31■■□□□ 1
CD48P09326 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.31■■□□□ 1
CD48P09326 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.31■■□□□ 1
CD48P09326 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.31■■□□□ 1
CD48P09326 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.31■■□□□ 1
CD48P09326 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.31■■□□□ 1
CD48P09326 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.31■■□□□ 1
CD48P09326 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CD48P09326 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD48P09326 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.3■■□□□ 1
CD48P09326 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.3■■□□□ 1
CD48P09326 AC020907.5-201ENST00000624372 1936 ntBASIC21.3■■□□□ 1
CD48P09326 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CD48P09326 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.3■■□□□ 1
CD48P09326 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.3■■□□□ 1
CD48P09326 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CD48P09326 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CD48P09326 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.3■■□□□ 1
CD48P09326 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CD48P09326 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 AL391422.3-201ENST00000603791 2761 ntBASIC21.29■■□□□ 1
CD48P09326 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.29■■□□□ 1
CD48P09326 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.29■■□□□ 1
CD48P09326 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.29■■□□□ 1
CD48P09326 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD48P09326 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms