Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
SH2D1AO60880 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.35■□□□□ 0.05
SH2D1AO60880 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.35■□□□□ 0.05
SH2D1AO60880 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SH2D1AO60880 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.35■□□□□ 0.05
SH2D1AO60880 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SH2D1AO60880 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SH2D1AO60880 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SH2D1AO60880 AC009237.3-201ENST00000393279 1427 ntBASIC15.34■□□□□ 0.05
SH2D1AO60880 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SH2D1AO60880 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.34■□□□□ 0.05
SH2D1AO60880 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SH2D1AO60880 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SH2D1AO60880 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.34■□□□□ 0.05
SH2D1AO60880 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.34■□□□□ 0.05
SH2D1AO60880 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SH2D1AO60880 AC011484.1-201ENST00000377652 1995 ntBASIC15.34■□□□□ 0.05
SH2D1AO60880 AC055733.4-201ENST00000638462 1354 ntBASIC15.34■□□□□ 0.05
SH2D1AO60880 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.34■□□□□ 0.05
SH2D1AO60880 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SH2D1AO60880 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SH2D1AO60880 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SH2D1AO60880 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SH2D1AO60880 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SH2D1AO60880 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.33■□□□□ 0.04
SH2D1AO60880 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.33■□□□□ 0.04
SH2D1AO60880 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SH2D1AO60880 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.33■□□□□ 0.04
SH2D1AO60880 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.33■□□□□ 0.04
SH2D1AO60880 SF1-220ENST00000626028 704 ntTSL 2 BASIC15.33■□□□□ 0.04
SH2D1AO60880 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SH2D1AO60880 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.33■□□□□ 0.04
SH2D1AO60880 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SH2D1AO60880 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SH2D1AO60880 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SH2D1AO60880 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 AC087289.5-201ENST00000586076 3175 ntBASIC15.32■□□□□ 0.04
SH2D1AO60880 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SH2D1AO60880 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.32■□□□□ 0.04
SH2D1AO60880 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SH2D1AO60880 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.32■□□□□ 0.04
SH2D1AO60880 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.32■□□□□ 0.04
SH2D1AO60880 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.32■□□□□ 0.04
SH2D1AO60880 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.32■□□□□ 0.04
SH2D1AO60880 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SH2D1AO60880 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.32■□□□□ 0.04
SH2D1AO60880 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.32■□□□□ 0.04
SH2D1AO60880 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SH2D1AO60880 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SH2D1AO60880 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SH2D1AO60880 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.32■□□□□ 0.04
SH2D1AO60880 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SH2D1AO60880 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.31■□□□□ 0.04
SH2D1AO60880 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SH2D1AO60880 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms