Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.32■□□□□ 0.04
SNAI2O43623 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.32■□□□□ 0.04
SNAI2O43623 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.32■□□□□ 0.04
SNAI2O43623 AP005435.1-201ENST00000529293 1178 ntBASIC15.32■□□□□ 0.04
SNAI2O43623 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.32■□□□□ 0.04
SNAI2O43623 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNAI2O43623 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNAI2O43623 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SNAI2O43623 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.32■□□□□ 0.04
SNAI2O43623 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SNAI2O43623 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNAI2O43623 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
SNAI2O43623 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNAI2O43623 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.31■□□□□ 0.04
SNAI2O43623 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.31■□□□□ 0.04
SNAI2O43623 AL356740.2-201ENST00000601559 647 ntBASIC15.31■□□□□ 0.04
SNAI2O43623 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.31■□□□□ 0.04
SNAI2O43623 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNAI2O43623 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SNAI2O43623 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SNAI2O43623 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.31■□□□□ 0.04
SNAI2O43623 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNAI2O43623 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SNAI2O43623 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
SNAI2O43623 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SNAI2O43623 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.3■□□□□ 0.04
SNAI2O43623 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SNAI2O43623 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 KRT16P3-201ENST00000439127 1283 ntBASIC15.3■□□□□ 0.04
SNAI2O43623 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.3■□□□□ 0.04
SNAI2O43623 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.3■□□□□ 0.04
SNAI2O43623 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SNAI2O43623 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.3■□□□□ 0.04
SNAI2O43623 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNAI2O43623 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNAI2O43623 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SNAI2O43623 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 AC121338.2-201ENST00000622535 1744 ntBASIC15.29■□□□□ 0.04
SNAI2O43623 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SNAI2O43623 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.29■□□□□ 0.04
SNAI2O43623 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 SRD5A1P1-201ENST00000442297 786 ntBASIC15.29■□□□□ 0.04
SNAI2O43623 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNAI2O43623 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.29■□□□□ 0.04
SNAI2O43623 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SNAI2O43623 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNAI2O43623 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.28■□□□□ 0.04
SNAI2O43623 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNAI2O43623 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms