Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 AC087633.2-202ENST00000565166 1439 ntBASIC21.55■■□□□ 1.04
CCL16O15467 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CCL16O15467 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCL16O15467 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCL16O15467 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.54■■□□□ 1.04
CCL16O15467 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CCL16O15467 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.54■■□□□ 1.04
CCL16O15467 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.54■■□□□ 1.04
CCL16O15467 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.54■■□□□ 1.04
CCL16O15467 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.54■■□□□ 1.04
CCL16O15467 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.54■■□□□ 1.04
CCL16O15467 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCL16O15467 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCL16O15467 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CCL16O15467 AC233723.2-201ENST00000623798 2106 ntBASIC21.53■■□□□ 1.04
CCL16O15467 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCL16O15467 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CCL16O15467 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.53■■□□□ 1.04
CCL16O15467 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CCL16O15467 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.53■■□□□ 1.04
CCL16O15467 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCL16O15467 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCL16O15467 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.53■■□□□ 1.04
CCL16O15467 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL16O15467 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.52■■□□□ 1.04
CCL16O15467 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL16O15467 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL16O15467 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.52■■□□□ 1.04
CCL16O15467 Z99916.2-201ENST00000604037 246 ntBASIC21.52■■□□□ 1.04
CCL16O15467 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.52■■□□□ 1.04
CCL16O15467 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL16O15467 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.52■■□□□ 1.04
CCL16O15467 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL16O15467 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCL16O15467 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCL16O15467 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCL16O15467 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.51■■□□□ 1.03
CCL16O15467 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.51■■□□□ 1.03
CCL16O15467 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CCL16O15467 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.51■■□□□ 1.03
CCL16O15467 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL16O15467 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.5■■□□□ 1.03
CCL16O15467 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CCL16O15467 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.5■■□□□ 1.03
CCL16O15467 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.5■■□□□ 1.03
CCL16O15467 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.5■■□□□ 1.03
CCL16O15467 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.5■■□□□ 1.03
CCL16O15467 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL16O15467 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.5■■□□□ 1.03
CCL16O15467 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCL16O15467 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCL16O15467 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.49■■□□□ 1.03
CCL16O15467 AC006557.6-201ENST00000623071 864 ntBASIC21.49■■□□□ 1.03
CCL16O15467 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL16O15467 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL16O15467 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms