Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPBD1B2RD01 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.66■□□□□ 0.58
CENPBD1B2RD01 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPBD1B2RD01 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPBD1B2RD01 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CENPBD1B2RD01 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CENPBD1B2RD01 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.64■□□□□ 0.58
CENPBD1B2RD01 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 TERF1P2-201ENST00000583350 1212 ntBASIC18.64■□□□□ 0.57
CENPBD1B2RD01 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.64■□□□□ 0.57
CENPBD1B2RD01 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 POU5F1P4-201ENST00000413175 1085 ntBASIC18.63■□□□□ 0.57
CENPBD1B2RD01 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.63■□□□□ 0.57
CENPBD1B2RD01 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 ZNRF2P3-201ENST00000424200 374 ntBASIC18.62■□□□□ 0.57
CENPBD1B2RD01 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 AC008175.2-201ENST00000612840 297 ntBASIC18.62■□□□□ 0.57
CENPBD1B2RD01 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CENPBD1B2RD01 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms