Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 SLC47A1P1-202ENST00000449666 945 ntBASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 AC055733.4-201ENST00000638462 1354 ntBASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRBV3S1A0A5B6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 AC004408.2-201ENST00000623613 2777 ntBASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 AC005332.7-201ENST00000614046 2005 ntBASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRBV3S1A0A5B6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.24■□□□□ 0.67
TCRBV3S1A0A5B6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 AL138724.1-201ENST00000606771 1088 ntBASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV3S1A0A5B6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV3S1A0A5B6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms