Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 AC079834.2-201ENST00000609776 1949 ntBASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3EA0A087X179 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.53■□□□□ 0.88
TBC1D3EA0A087X179 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 AC093827.2-201ENST00000512654 315 ntBASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 AC105020.6-201ENST00000621523 1217 ntBASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TBC1D3EA0A087X179 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3EA0A087X179 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3EA0A087X179 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3EA0A087X179 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TBC1D3EA0A087X179 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 AC092368.3-202ENST00000574180 1591 ntBASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 AL117328.2-201ENST00000624617 1940 ntBASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 AC098590.1-201ENST00000468126 897 ntBASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 RPS2P52-201ENST00000469610 820 ntBASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 PNMA6B-201ENST00000538162 1200 ntBASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 AC142381.4-202ENST00000563973 229 ntBASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.51■□□□□ 0.87
TBC1D3EA0A087X179 PKD1P6-201ENST00000343738 4769 ntBASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 AL158047.1-201ENST00000445918 881 ntBASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.5■□□□□ 0.87
TBC1D3EA0A087X179 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3EA0A087X179 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3EA0A087X179 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3EA0A087X179 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.49■□□□□ 0.87
TBC1D3EA0A087X179 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3EA0A087X179 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.49■□□□□ 0.87
TBC1D3EA0A087X179 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TBC1D3EA0A087X179 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms