Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB1Q9Y5G3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB1Q9Y5G3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB1Q9Y5G3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB1Q9Y5G3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGB1Q9Y5G3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 AC116562.4-201ENST00000641316 2276 ntBASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 MIR3181-201ENST00000578512 73 ntBASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 AC005837.3-201ENST00000612163 286 ntBASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 AP004607.7-201ENST00000527152 1677 ntBASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGB1Q9Y5G3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGB1Q9Y5G3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGB1Q9Y5G3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGB1Q9Y5G3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGB1Q9Y5G3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGB1Q9Y5G3 AC096631.2-201ENST00000436136 790 ntBASIC18.83■□□□□ 0.6
PCDHGB1Q9Y5G3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGB1Q9Y5G3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PCDHGB1Q9Y5G3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGB1Q9Y5G3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB1Q9Y5G3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms