Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.52■■□□□ 1.84
CCNL1Q9UK58 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CCNL1Q9UK58 AC068473.5-201ENST00000616428 2072 ntBASIC26.52■■□□□ 1.84
CCNL1Q9UK58 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 AC005829.2-201ENST00000571422 1056 ntBASIC26.51■■□□□ 1.83
CCNL1Q9UK58 CD177P1-201ENST00000606252 935 ntBASIC26.51■■□□□ 1.83
CCNL1Q9UK58 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 AC010542.4-201ENST00000563151 1910 ntBASIC26.51■■□□□ 1.83
CCNL1Q9UK58 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.51■■□□□ 1.83
CCNL1Q9UK58 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCNL1Q9UK58 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CCNL1Q9UK58 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.5■■□□□ 1.83
CCNL1Q9UK58 KRT18P35-201ENST00000510488 1269 ntBASIC26.5■■□□□ 1.83
CCNL1Q9UK58 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCNL1Q9UK58 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCNL1Q9UK58 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.5■■□□□ 1.83
CCNL1Q9UK58 RN7SL850P-201ENST00000579959 291 ntBASIC26.5■■□□□ 1.83
CCNL1Q9UK58 AL353708.3-201ENST00000610272 989 ntBASIC26.5■■□□□ 1.83
CCNL1Q9UK58 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.5■■□□□ 1.83
CCNL1Q9UK58 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.49■■□□□ 1.83
CCNL1Q9UK58 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.48■■□□□ 1.83
CCNL1Q9UK58 AC116050.2-201ENST00000612102 1779 ntBASIC26.48■■□□□ 1.83
CCNL1Q9UK58 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNL1Q9UK58 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNL1Q9UK58 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.83
CCNL1Q9UK58 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.45■■□□□ 1.83
CCNL1Q9UK58 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CCNL1Q9UK58 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CCNL1Q9UK58 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 AC026471.5-201ENST00000615068 467 ntBASIC26.45■■□□□ 1.82
CCNL1Q9UK58 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 AC087633.2-202ENST00000565166 1439 ntBASIC26.45■■□□□ 1.82
CCNL1Q9UK58 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCNL1Q9UK58 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNL1Q9UK58 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNL1Q9UK58 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms