Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 BX276092.2-201ENST00000417668 665 ntBASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 AC133041.1-202ENST00000642053 222 ntBASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF304Q9HCX3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 AC116050.2-201ENST00000612102 1779 ntBASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF304Q9HCX3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 AC073210.2-201ENST00000430369 194 ntBASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 AC069152.1-201ENST00000438030 544 ntBASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 Z98882.1-201ENST00000622160 2253 ntBASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF304Q9HCX3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF304Q9HCX3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 AC100791.3-201ENST00000617619 330 ntBASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF304Q9HCX3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.52■□□□□ 0.72
ZNF304Q9HCX3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms