Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 UNC93B2-201ENST00000285383 730 ntBASIC19.48■□□□□ 0.71
CHD8Q9HCK8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 KRT18P16-201ENST00000510337 1294 ntBASIC19.48■□□□□ 0.71
CHD8Q9HCK8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD8Q9HCK8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.47■□□□□ 0.71
CHD8Q9HCK8 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 FAM8A6P-201ENST00000407496 1135 ntBASIC19.47■□□□□ 0.71
CHD8Q9HCK8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 LINC00526-201ENST00000581067 1875 ntBASIC19.47■□□□□ 0.71
CHD8Q9HCK8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHD8Q9HCK8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 AL353807.1-201ENST00000427475 662 ntBASIC19.46■□□□□ 0.71
CHD8Q9HCK8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 MIR1238-201ENST00000408483 83 ntBASIC19.46■□□□□ 0.71
CHD8Q9HCK8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 AC005829.2-201ENST00000571422 1056 ntBASIC19.46■□□□□ 0.71
CHD8Q9HCK8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CHD8Q9HCK8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.7
CHD8Q9HCK8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CHD8Q9HCK8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 KRT8P10-201ENST00000450021 1447 ntBASIC19.44■□□□□ 0.7
CHD8Q9HCK8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 PVRIG2P-201ENST00000435460 978 ntBASIC19.44■□□□□ 0.7
CHD8Q9HCK8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHD8Q9HCK8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 AL691432.3-201ENST00000621860 400 ntBASIC19.43■□□□□ 0.7
CHD8Q9HCK8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHD8Q9HCK8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms