Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC110285.6-201ENST00000617652 491 ntBASIC12.23□□□□□ -0.45
LIMD2Q9BT23 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC12.23□□□□□ -0.45
LIMD2Q9BT23 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC12.22□□□□□ -0.45
LIMD2Q9BT23 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 BX005040.4-201ENST00000637145 1518 ntBASIC12.21□□□□□ -0.45
LIMD2Q9BT23 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 AL358852.1-201ENST00000623174 1268 ntBASIC12.21□□□□□ -0.45
LIMD2Q9BT23 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC12.21□□□□□ -0.45
LIMD2Q9BT23 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC12.21□□□□□ -0.46
LIMD2Q9BT23 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.21□□□□□ -0.46
LIMD2Q9BT23 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIMD2Q9BT23 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC12.21□□□□□ -0.46
LIMD2Q9BT23 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
LIMD2Q9BT23 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 MFF-203ENST00000349901 1716 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 NME4-202ENST00000382940 766 ntTSL 3 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 NME4-211ENST00000620944 1193 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 ASL-203ENST00000380839 1765 ntTSL 5 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIMD2Q9BT23 Z98882.1-201ENST00000622160 2253 ntBASIC12.2□□□□□ -0.46
LIMD2Q9BT23 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms