Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL121832.2-201ENST00000610979 668 ntBASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 AF106564.1-201ENST00000607058 2553 ntBASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD1Q96NR3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 AF201337.1-201ENST00000520239 748 ntBASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 AC133552.2-202ENST00000575694 574 ntBASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD1Q96NR3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 HLA-L-209ENST00000420110 1011 ntBASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 AC105036.2-201ENST00000569468 176 ntBASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 AC016405.3-201ENST00000607710 860 ntBASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 AL109923.1-201ENST00000618799 583 ntBASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 OR10C1-204ENST00000622521 1039 ntBASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTCHD1Q96NR3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 FEM1AP4-201ENST00000443167 1987 ntBASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 AC116050.2-201ENST00000612102 1779 ntBASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD1Q96NR3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 AC007322.3-201ENST00000426526 701 ntBASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 RARRES2P4-201ENST00000514074 484 ntBASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.41■□□□□ 0.7
PTCHD1Q96NR3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PTCHD1Q96NR3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms