Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.18■□□□□ 0.98
C9orf72Q96LT7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 AC055733.4-201ENST00000638462 1354 ntBASIC21.17■□□□□ 0.98
C9orf72Q96LT7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 AC020907.5-201ENST00000624372 1936 ntBASIC21.17■□□□□ 0.98
C9orf72Q96LT7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.17■□□□□ 0.98
C9orf72Q96LT7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 AC112907.3-201ENST00000577781 2400 ntBASIC21.16■□□□□ 0.98
C9orf72Q96LT7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
C9orf72Q96LT7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 AC105233.4-201ENST00000642045 216 ntBASIC21.15■□□□□ 0.98
C9orf72Q96LT7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C9orf72Q96LT7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
C9orf72Q96LT7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
C9orf72Q96LT7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
C9orf72Q96LT7 AC009237.3-201ENST00000393279 1427 ntBASIC21.14■□□□□ 0.98
C9orf72Q96LT7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
C9orf72Q96LT7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 FP700111.2-201ENST00000619190 1892 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DUX4L2-201ENST00000561772 1275 ntBASIC21.13■□□□□ 0.97
C9orf72Q96LT7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C9orf72Q96LT7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms