Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RITA1Q96K30 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.57■□□□□ 0.24
RITA1Q96K30 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.57■□□□□ 0.24
RITA1Q96K30 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.57■□□□□ 0.24
RITA1Q96K30 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.57■□□□□ 0.24
RITA1Q96K30 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.57■□□□□ 0.24
RITA1Q96K30 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.57■□□□□ 0.24
RITA1Q96K30 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RITA1Q96K30 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RITA1Q96K30 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.57■□□□□ 0.24
RITA1Q96K30 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RITA1Q96K30 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RITA1Q96K30 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RITA1Q96K30 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.56■□□□□ 0.24
RITA1Q96K30 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RITA1Q96K30 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RITA1Q96K30 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RITA1Q96K30 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.56■□□□□ 0.24
RITA1Q96K30 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.56■□□□□ 0.24
RITA1Q96K30 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.56■□□□□ 0.24
RITA1Q96K30 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RITA1Q96K30 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RITA1Q96K30 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.56■□□□□ 0.24
RITA1Q96K30 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RITA1Q96K30 AC092667.1-201ENST00000434301 2586 ntBASIC16.56■□□□□ 0.24
RITA1Q96K30 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.56■□□□□ 0.24
RITA1Q96K30 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RITA1Q96K30 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RITA1Q96K30 FP700111.2-201ENST00000619190 1892 ntBASIC16.55■□□□□ 0.24
RITA1Q96K30 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 AC016769.1-201ENST00000409132 1010 ntBASIC16.55■□□□□ 0.24
RITA1Q96K30 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 AC006015.1-201ENST00000429970 570 ntBASIC16.55■□□□□ 0.24
RITA1Q96K30 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.55■□□□□ 0.24
RITA1Q96K30 IKBKGP1-201ENST00000612193 1073 ntBASIC16.55■□□□□ 0.24
RITA1Q96K30 AC243732.1-201ENST00000612648 864 ntBASIC16.55■□□□□ 0.24
RITA1Q96K30 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.55■□□□□ 0.24
RITA1Q96K30 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RITA1Q96K30 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RITA1Q96K30 FEM1AP1-201ENST00000431297 1995 ntBASIC16.55■□□□□ 0.24
RITA1Q96K30 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.55■□□□□ 0.24
RITA1Q96K30 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
RITA1Q96K30 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 AC007225.1-201ENST00000566331 1836 ntBASIC16.54■□□□□ 0.24
RITA1Q96K30 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RITA1Q96K30 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.54■□□□□ 0.24
RITA1Q96K30 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.54■□□□□ 0.24
RITA1Q96K30 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.54■□□□□ 0.24
RITA1Q96K30 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.54■□□□□ 0.24
RITA1Q96K30 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.54■□□□□ 0.24
RITA1Q96K30 TERF1P5-201ENST00000477545 1207 ntBASIC16.54■□□□□ 0.24
RITA1Q96K30 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RITA1Q96K30 MFSD11-216ENST00000590393 1141 ntBASIC16.54■□□□□ 0.24
RITA1Q96K30 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.54■□□□□ 0.24
RITA1Q96K30 AC010536.3-201ENST00000620306 533 ntBASIC16.54■□□□□ 0.24
RITA1Q96K30 LINC01006-201ENST00000333319 2292 ntBASIC16.54■□□□□ 0.24
RITA1Q96K30 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
RITA1Q96K30 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RITA1Q96K30 AC116050.2-201ENST00000612102 1779 ntBASIC16.54■□□□□ 0.24
RITA1Q96K30 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RITA1Q96K30 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.53■□□□□ 0.24
RITA1Q96K30 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RITA1Q96K30 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RITA1Q96K30 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RITA1Q96K30 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.53■□□□□ 0.24
RITA1Q96K30 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
RITA1Q96K30 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RITA1Q96K30 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RITA1Q96K30 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RITA1Q96K30 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms