Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A1Q93050 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 AL355472.2-201ENST00000422958 438 ntBASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A1Q93050 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 AC093827.2-201ENST00000512654 315 ntBASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 AC100791.3-201ENST00000617619 330 ntBASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A1Q93050 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A1Q93050 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 KRT17P1-201ENST00000399211 1546 ntBASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 LINC00565-201ENST00000562710 2331 ntBASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A1Q93050 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.08■■□□□ 1.29
ATP6V0A1Q93050 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms