Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDH20Q8N6Y1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 SLC29A4P1-201ENST00000398760 971 ntBASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 AL512625.2-201ENST00000417533 625 ntBASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 GUSBP6-202ENST00000438529 1198 ntBASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 RARRES2P4-201ENST00000514074 484 ntBASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 AC016405.3-201ENST00000607710 860 ntBASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH20Q8N6Y1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 FAM21FP-204ENST00000608637 956 ntBASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDH20Q8N6Y1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH20Q8N6Y1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 Z98882.1-201ENST00000622160 2253 ntBASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH20Q8N6Y1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH20Q8N6Y1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
PCDH20Q8N6Y1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDH20Q8N6Y1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
PCDH20Q8N6Y1 AC005229.4-201ENST00000610085 2198 ntBASIC21.02■□□□□ 0.95
PCDH20Q8N6Y1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 MKRN4P-201ENST00000444706 1521 ntBASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 AL355802.2-201ENST00000402069 882 ntBASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 AC093787.1-201ENST00000450396 207 ntBASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 AC142086.2-201ENST00000569753 217 ntBASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH20Q8N6Y1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH20Q8N6Y1 AC007322.3-201ENST00000426526 701 ntBASIC21■□□□□ 0.95
PCDH20Q8N6Y1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms