Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 AC091799.1-201ENST00000422823 811 ntBASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 AC007322.3-201ENST00000426526 701 ntBASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 AC008694.1-202ENST00000636953 945 ntBASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 AC073111.5-205ENST00000641717 521 ntBASIC20.08■□□□□ 0.81
RAB42Q8N4Z0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RAB42Q8N4Z0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB42Q8N4Z0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.08■□□□□ 0.8
RAB42Q8N4Z0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB42Q8N4Z0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RAB42Q8N4Z0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB42Q8N4Z0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 AC026185.1-201ENST00000445748 174 ntBASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 AC069236.1-201ENST00000604339 616 ntBASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.07■□□□□ 0.8
RAB42Q8N4Z0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RAB42Q8N4Z0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 AC005181.1-201ENST00000604782 1256 ntBASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB42Q8N4Z0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 CNN2P6-201ENST00000439038 900 ntBASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB42Q8N4Z0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB42Q8N4Z0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RAB42Q8N4Z0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB42Q8N4Z0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB42Q8N4Z0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB42Q8N4Z0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB42Q8N4Z0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB42Q8N4Z0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms