Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CRLF3Q8IUI8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CRLF3Q8IUI8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 TSPY26P-201ENST00000476365 1326 ntBASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CRLF3Q8IUI8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CRLF3Q8IUI8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CRLF3Q8IUI8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 RNF165-205ENST00000588679 2904 ntBASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CRLF3Q8IUI8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms