Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 KRT18P20-201ENST00000548986 1279 ntBASIC18.15■□□□□ 0.5
RTTNQ86VV8 UBE2DNL-204ENST00000602536 740 ntBASIC18.15■□□□□ 0.5
RTTNQ86VV8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTTNQ86VV8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.15■□□□□ 0.5
RTTNQ86VV8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTTNQ86VV8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 KRT18P11-201ENST00000435214 1283 ntBASIC18.14■□□□□ 0.49
RTTNQ86VV8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 AC053503.5-201ENST00000601508 636 ntBASIC18.14■□□□□ 0.49
RTTNQ86VV8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTTNQ86VV8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTTNQ86VV8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTTNQ86VV8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTTNQ86VV8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTTNQ86VV8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 MYCNOS-205ENST00000641950 531 ntBASIC18.14■□□□□ 0.49
RTTNQ86VV8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
RTTNQ86VV8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTTNQ86VV8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.13■□□□□ 0.49
RTTNQ86VV8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTTNQ86VV8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTTNQ86VV8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.13■□□□□ 0.49
RTTNQ86VV8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTTNQ86VV8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RTTNQ86VV8 KRT18P6-201ENST00000555540 1265 ntBASIC18.13■□□□□ 0.49
RTTNQ86VV8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.13■□□□□ 0.49
RTTNQ86VV8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTTNQ86VV8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTTNQ86VV8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.11■□□□□ 0.49
RTTNQ86VV8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTTNQ86VV8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.11■□□□□ 0.49
RTTNQ86VV8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.11■□□□□ 0.49
RTTNQ86VV8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RTTNQ86VV8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.11■□□□□ 0.49
RTTNQ86VV8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.11■□□□□ 0.49
RTTNQ86VV8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTTNQ86VV8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.1■□□□□ 0.49
RTTNQ86VV8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTTNQ86VV8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.1■□□□□ 0.49
RTTNQ86VV8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.1■□□□□ 0.49
RTTNQ86VV8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.1■□□□□ 0.49
RTTNQ86VV8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTTNQ86VV8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTTNQ86VV8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.1■□□□□ 0.49
RTTNQ86VV8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.1■□□□□ 0.49
RTTNQ86VV8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
RTTNQ86VV8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTTNQ86VV8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTTNQ86VV8 PLK5-205ENST00000642079 1969 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms