Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MRPL55Q7Z7F7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 AC006128.1-201ENST00000624704 1661 ntBASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 AC142381.2-201ENST00000566120 298 ntBASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 AL358852.1-201ENST00000623174 1268 ntBASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MRPL55Q7Z7F7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 AC053503.5-201ENST00000601508 636 ntBASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 AL031432.3-201ENST00000607698 485 ntBASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MRPL55Q7Z7F7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
MRPL55Q7Z7F7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 AC121338.2-201ENST00000622535 1744 ntBASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 LINC01521-201ENST00000504184 1943 ntBASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 SUDS3P1-201ENST00000505831 966 ntBASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.2□□□□□ -0.3
MRPL55Q7Z7F7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms